TYPE OF COURSE UNIT	Elective Course
LEVEL OF COURSE UNIT	Master's Degree With Thesis
YEAR OF STUDY	-
SEMESTER	-
NUMBER OF ECTS CREDITS ALLOCATED	10
NAME OF LECTURER(S)	Associate Professor Ceyhun Kayıhan
LEARNING OUTCOMES OF THE COURSE UNIT	At the end of this course, the students; 1) Learn the first-, second- and third-generation sequencing. 2) Learn the NGS service providers, DNA and RNA data analysis and storage. 3) Learn the impact and applications of NGS. 4) Learn the single cell omics technologies.
MODE OF DELIVERY	Face to face
PRE-REQUISITES OF THE COURSE	No
RECOMMENDED OPTIONAL PROGRAMME COMPONENT	No
COURSE DEFINITION	This course covers the history of omics applications, the first, second and third-generation sequencing, the NGS service providers, DNA and RNA data analysis and storage, the impact and applications of NGS and the single cell omics technologies.
COURSE CONTENTS	WEEK TOPICS 1st Week The history of omics applications 2nd Week The first, second and third-generation sequencing I 3rd Week The first, second and third-generation sequencing II 4th Week The first, second and third-generation sequencing III 5th Week the NGS service providers, DNA and RNA data analysis I 6th Week the NGS service providers, DNA and RNA data analysis II 7th Week Data storage 8th Week Presentations 9th Week NGS applications I 10th Week NGS applications II 11th Week The single cell omics Technologies I 12th Week The single cell omics Technologies II 13th Week Presentations 14th Week Presentations
RECOMENDED OR REQUIRED READING	Next Generation Sequencing: Advances, Applications and Challenges, Ed. Jerzy Kulski, 2016 InTech, 2012.
PLANNED LEARNING ACTIVITIES AND TEACHING METHODS	Lecture,Discussion,Questions/Answers,Problem Solving,Presentation
ASSESSMENT METHODS AND CRITERIA	Quantity Percentage(%) Project 1 40 Attendance 1 10 Presentation of Article 2 50 Total(%) 100 Contribution of In-term Studies to Overall Grade(%) 100 Contribution of Final Examination to Overall Grade(%) 0 Total(%) 100
ECTS WORKLOAD	Activities Number Hours Workload Midterm exam Preparation for Quiz Individual or group work Preparation for Final exam Course hours 14 3 42 Preparation for Midterm exam Laboratory (including preparation) Final exam Homework Presentation (including preperation) 2 90 180 Project 1 80 80 Total Workload 302 Total Workload / 30 10,06 ECTS Credits of the Course 10
LANGUAGE OF INSTRUCTION	English
WORK PLACEMENT(S)	No