| TYPE OF COURSE UNIT | Elective Course |
| LEVEL OF COURSE UNIT | Bachelor's Degree |
| YEAR OF STUDY | - |
| SEMESTER | - |
| NUMBER OF ECTS CREDITS ALLOCATED | 4 |
| NAME OF LECTURER(S) | Associate Professor Ceyhun Kayıhan
|
| LEARNING OUTCOMES OF THE COURSE UNIT |
At the end of this course, the students;
1) Learn the historical perspectives of omics technologies and their types.
2) Learn the usage areas and current applications of genomics, functional genomics and proteomics technologies.
3) Learn the system biology by combining data from omics technologies.
|
| MODE OF DELIVERY | Face to face |
| PRE-REQUISITES OF THE COURSE | No |
| RECOMMENDED OPTIONAL PROGRAMME COMPONENT | None |
| COURSE DEFINITION | In this course, the students learn the historical perspectives of omics technologies and their types and learn the usage areas and current applications of genomics and functional genomics and proteomics. |
| COURSE CONTENTS | | WEEK | TOPICS |
|---|
| 1st Week | Introduction, Historical Perpesctive | | 2nd Week | Genes, genomes and human genome projects | | 3rd Week | Genomes of model organisms, high capacity vectors | | 4th Week | DNA sequencing methods | | 5th Week | Genome mapping | | 6th Week | Genome sequencing methods | | 7th Week | Genome sequencing annotations | | 8th Week | Midterm Exam | | 9th Week | Functional genomics I | | 10th Week | Functional genomics I | | 11th Week | Proteomics I | | 12th Week | Proteomics II | | 13th Week | Phosphoproteomics, Glycoproteomics | | 14th Week | System biology |
|
| RECOMENDED OR REQUIRED READING | Applications of Advanced Omics Technologies: From Genes to Metabolites, Virginia Garcia-Canas Alejandro Cifuentes Carolina Simo, Volume 64, 1st Edition
Concepts and Techniques in Genomics and Proteomics, Nachimuthu Saraswathy and Ponnusamy Ramalingam, 2011.
Introduction to Proteomics Tools for the New Biology, DANIEL C. LIEBLER 2002.
Principles of Genome Analysis and Genomics, Sandy B. Primrose,
Richard M. Twyman, Third Edition, 2003
|
| PLANNED LEARNING ACTIVITIES AND TEACHING METHODS | Lecture,Discussion,Questions/Answers,Problem Solving,Project,Presentation |
| ASSESSMENT METHODS AND CRITERIA | | | Quantity | Percentage(%) |
|---|
| Mid-term | 1 | 30 | | Project | 1 | 15 | | Attendance | 1 | 5 | | Presentation of Article | 1 | 10 | | Total(%) | | 60 | | Contribution of In-term Studies to Overall Grade(%) | | 60 | | Contribution of Final Examination to Overall Grade(%) | | 40 | | Total(%) | | 100 |
|
| ECTS WORKLOAD |
| Activities |
Number |
Hours |
Workload |
| Midterm exam | 1 | 2 | 2 | | Preparation for Quiz | | | | | Individual or group work | 13 | 2 | 26 | | Preparation for Final exam | 1 | 25 | 25 | | Course hours | 13 | 3 | 39 | | Preparation for Midterm exam | 1 | 20 | 20 | | Laboratory (including preparation) | | | | | Final exam | 1 | 2 | 2 | | Homework | | | | | Presentation (including preperation) | 1 | 8 | 8 | | Total Workload | | | 122 |
|---|
| Total Workload / 30 | | | 4,06 |
|---|
| ECTS Credits of the Course | | | 4 |
|---|
|
| LANGUAGE OF INSTRUCTION | English |
| WORK PLACEMENT(S) | No |
| | |
